Snakemake: Difference between revisions
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Snakemake for Bioconda documentation: https://bioconda.github.io/recipes/snakemake/README.html | Snakemake for Bioconda documentation: https://bioconda.github.io/recipes/snakemake/README.html | ||
Snakemake Biocontainer: https://quay.io/repository/biocontainers/snakemake | |||
Revision as of 04:51, 10 February 2018
Snakemake is a pythonic way of writing makefiles.
Snakemake works with distributions like anaconda to package and install dependencies. I recommend using Pyenv to keep things organized and separated out.
Snakemake documentation: https://snakemake.readthedocs.io/en/stable/
Snakemake for Bioconda documentation: https://bioconda.github.io/recipes/snakemake/README.html
Snakemake Biocontainer: https://quay.io/repository/biocontainers/snakemake