From charlesreid1

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==Rosalind==
==Rosalind==


Solving the bioinformatics problems on Rosalind.org using Go.
As part of a reading group I am participating in, I am solving the bioinformatics problems on Rosalind.info using Go.


Link to problems: http://rosalind.info/problems/list-view/?location=bioinformatics-textbook-track
Link to Rosalind bioinformatics problems: http://rosalind.info/problems/list-view/?location=bioinformatics-textbook-track


[[Rosalind]] - list of all Rosalind problems
For all Rosalind problems, visit [[Rosalind]]
 
[[Rosalind/Problem 1A]] - allows us to count the number of occurrences of substring A in a longer string B
 
[[Rosalind/Problem 1B]] -


==Links==
==Links==

Revision as of 04:51, 12 December 2018

Go Basics

Go/Installing - installing Go

Go/Basics - getting started with Go

Go/Basics#Paths - getting started with all the different Go paths


Go Hello World

Ah, yes, the quintessential Go/Hello World program.

Go Command Line Tools

To build a command line tool, you'll set up a directory structure like cmd/.

The command line interface should be defined in a file that uses a library like one of the following:

Go Tests

...

Rosalind

As part of a reading group I am participating in, I am solving the bioinformatics problems on Rosalind.info using Go.

Link to Rosalind bioinformatics problems: http://rosalind.info/problems/list-view/?location=bioinformatics-textbook-track

For all Rosalind problems, visit Rosalind

Links

Go libraries for data science: http://www.mjhall.org/golang-data-science-libraries/

Graph object in algorithm implementations: https://godoc.org/github.com/twmb/algoimpl/go/graph

Algorithm implementations in Go/C/Java: https://github.com/twmb/algoimpl

gograph: https://github.com/gyuho/goraph

learn: topological sort: https://github.com/gyuho/learn/tree/master/doc/go_graph_topological_sort

Go land mines - also shows some neat javascript-style function syntax (defer): https://gist.github.com/lavalamp/4bd23295a9f32706a48f

Docker and Go: https://gist.github.com/17twenty/069bb0c0c19f72f7828bb80eee39d0a6


Testing installation of Go/upgrading: https://www.digitalocean.com/community/tutorials/how-to-install-go-1-7-on-debian-8