Rosalind
From charlesreid1
Link to problems on Rosalind.info: http://rosalind.info/problems/list-view/?location=bioinformatics-textbook-track
Go
See Go for general notes on the Go language.
Example Go project organization: https://github.com/moul/euler
How problems are organized
To organize the Rosalind problems in a way that keeps them separated and modular but useful, we do the following:
- Each problem is identified on the website with the chapter (indexed by number) and problem from the chapter (indexed by letter)
- Code for problem P from chapter N will be in
baNP.go - Code to test the code for problem P and chapter N will be in
baNP_test.go - (LATER) The main method is used to run a command line interface to each of the problem solutions
To test all code for all problems, we simply run go test.
To run specific problems, we run go run main to run the main driver, and interact with the command line tool to run specific problems.
Problems in Go
Flags
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Rosalind.info Bioinformatics solving problems from the Rosalind.info bioinformatics track
Bioinformatics Track: Rosalind/BA1A/Go - substring count Rosalind/BA1B/Go - most frequent substring
Image Credit (left): cartoon by Rori! Flags · Template:RosalindFlag · e |
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Go notes on Go
Go/Strings · Go/Arrays · Go/Slices
Go/Lists · Go/Maps · Go/Stacks · Go/Queues
Go/Naming Conventions · Go/Design Patterns
Go/Timing · Go/Profiling · Go/Benchmarking
Go/Tests · Go/Travis CI · Go/Makefiles
our vim + go setup uses custom solarized colors for Golang
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