Matplotlib
From charlesreid1
Contents
Using Matplotlib in Web Apps
I wanted to write a Python web app that would call Matplotlib to visualize some data on the back end, and serve it up to a browser window on the front end.
Initially I saw [webplotlib https://pypi.python.org/pypi/webplotlib/0.1], which looked promising, but wrapped all of matplotlib into two dinky kinds of plots: time series, and bar charts. I needed something that, like webplotlib, could communicate a figure to a browser, but something that, unlike webplotlib, still kept the full functionality of matplotlib.
The fix was easy. The core functionality of webplotlib is passing a figure as a string to the browser; this is about 4 lines. The rest is entirely case-dependent.
Let's walk through how to do this.
Step 1: Create Your Figure
Some quick code to make a dummy figure:
def make_dummy_figure():
import matplotlib.pylab as plt
from numpy.random import *
fig = plt.figure()
ax1 = fig.add_subplot(1,2,1)
ax2 = fig.add_subplot(1,2,2)
x = range(10)
y1 = rand(10,)
y2 = 1000*rand(10,)
ax1.plot(x,y1,'b-')
ax2.plot(x,y2,'r-')
ax1.set_xlabel('Number of Llamas')
ax1.set_ylabel('People killed')
ax2.set_xlabel('Number of Tigers')
ax2.set_ylabel('People killed')
Step 2: Make a Sendable Figure
To send a figure to our web application, we need to make the figure sendable. We modify the script to return a FigureCanvas handle to our figure,
import matplotlib.pylab as plt
from numpy.random import *
matplotlib.use('Agg')
from matplotlib.backends.backend_agg import FigureCanvasAgg as FigureCanvas
def make_dummy_figure():
fig = plt.figure()
ax1 = fig.add_subplot(1,2,1)
ax2 = fig.add_subplot(1,2,2)
x = range(10)
y1 = rand(10,)
y2 = 1000*rand(10,)
ax1.plot(x,y1,'b-')
ax2.plot(x,y2,'r-')
ax1.set_xlabel('Number of Llamas')
ax1.set_ylabel('People killed')
ax2.set_xlabel('Number of Tigers')
ax2.set_ylabel('People killed')
return FigureCanvas(fig)
Step 3: Should've Put a String on it
Let's define a function that will turn that figure into a StringIO object:
def stringify_dummy_figure(): figcanvas = make_dummy_figure() img_data_str = StringIO() figcanvas.print_png(img_data_str) img_data_str.seek(0) # After writing, rewind data for further use. return img_data_str.read()
Step 4: Make an HTTP Response
The last step is to pass that string to an HTTP response
from django.http import HttpResponse, HttpResponseRedirect img_str = stringify_dummy_figure() response = HttpResponse(img_str, mimetype='image/png')
and that can be embedded into your web app, wherever it lays out the logic for parsing URLs and crafting HTTP responses.
Scientific Computing Topics in scientific computing.
Numerical Software: Lapack · Sundials · Matlab · Octave · FFTW Petsc · Example Petsc Makefile · Trilinos · Hypre · Ginac · Gnuplot
Python: Numpy · Scipy · Pandas · Matplotlib · Python Sundials · Py4Sci Scikit-learn: Sklearn · Skimage
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Python a powerful programming language
Scientific Python: Data analysis libraries: Scipy · Numpy · Pandas · Statsmodel Machine learning libraries: Sklearn Neural network libraries: Tensorflow · Keras Plotting/viz: Matplotlib · Seaborn · Jupyter Solving partial differential equations and bessel functions: Fipy · Bessel Functions
Web and Networking Python: Web programming: Flask · Webapps · Mechanize · Scrapy · Gunicorn Wifi: Wireless/Python · Scapy IPython and Jupyter: Jupyter
Drawing, Geometry, and Shapes: Shapely (for drawing shapes): Shapely Geography library: Geos
General Useful Python Utilities: Python Remote Objects: Pyro Logging (create multi-channel log messages): Logging Keyboard (control keyboard from Python): Keyboard
Black Hat Python: Network scanning: Python/Scanner
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